Publications

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Journal papers

1. Personalized logical models to investigate cancer response to BRAF treatments in melanomas and colorectal cancers
   J. Béal, L. Pantolini, V. Noël, E. Barillot, and L. Calzone.
   In PLOS Computational Biology, vol. 17 no. 1p. e1007900, 2021.
   paper code
2. Genetic markers and phosphoprotein forms of beta-catenin pβ-Cat552 and pβ-Cat675 are prognostic biomarkers of cervical cancer
   S. M. Scholl, J. Béal, L. de Koning, E. Girard, M. Popovic, A. de la Rochefordière, F. Lecuru, V. Fourchotte, C. Ngo, A. Floquet, and others.
   In EBioMedicine, vol. 61p. 103049, 2020.
   paper
3. Uncertainty reduction in biochemical kinetic models: Enforcing desired model properties
   L. Miskovic, J. Béal, M. Moret, and V. Hatzimanikatis.
   In PLoS Computational Biology, 2019.
   paper
4. Personalization of Logical Models With Multi-Omics Data Allows Clinical Stratification of Patients
   J. Béal, A. Montagud, P. Traynard, E. Barillot, and L. Calzone.
   In Frontiers in Physiology, 2019.
   paper code

Preprints

1. Causal inference with multiple versions of treatment and application to personalized medicine, arXiv, 2020
   arXiv code

Conference papers

1. Machine Learning for Uncertainty Reduction in Biochemical Kinetic Models
   L. Miskovic, J. Beal, M. Moret, and V. Hatzimanikatis.
   In 5th Conference on Constraint-Based Reconstruction and Analysis, 2018.

Others